PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G150900.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 253aa    MW: 27878 Da    PI: 9.7292
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G150900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.6e-08162202954
                        HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Aqcoe5G150900.1.p 162 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 202
                        699*****************87.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.434153202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-13154212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-14157211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-13159208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.3E-6163202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.99E-6176207No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MEVDLLKCAT EEQMEMMMMM MQMDKLPEFN GSFPDISELP LIDFSGGTSN SCTGITSPMF  60
ANTTNASSSS SSSFSFMNSN LQDPSAPPIL PNGMSGKFKN GADLLGTNNF SCPSQKRNSM  120
AAMREMIFRI AAMQPIHIDP ESVKPPKRRN VKISKDPQSV AARHRRERIS ERIRILQRLV  180
PGGTKMDTAS MLDEAIHYVK FLKTQVQSLE RAATNRPTTS LGYPAGVSNP NYSSFGKAYQ  240
PPQMFSSTPM LR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002282817.13e-92PREDICTED: transcription factor HEC1
SwissprotQ9FHA72e-52HEC1_ARATH; Transcription factor HEC1
TrEMBLE0CPU44e-92E0CPU4_VITVI; Putative uncharacterized protein
STRINGVIT_18s0001g10400.t011e-91(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.13e-43bHLH family protein